A Family of Symplectic Integrators: Stability, Accuracy, and Molecular Dynamics Applications
نویسندگان
چکیده
The following integration methods for special second-order ordinary differential equations are studied: leapfrog, implicit midpoint, trapezoid, Störmer–Verlet, and Cowell–Numerov. We show that all are members, or equivalent to members, of a one-parameter family of schemes. Some methods have more than one common form, and we discuss a systematic enumeration of these forms. We also present a stability and accuracy analysis based on the idea of “modified equations” and a proof of symplecticness. It follows that Cowell–Numerov and “LIM2” (a method proposed by Zhang and Schlick) are symplectic. A different interpretation of the values used by these integrators leads to higher accuracy and better energy conservation. Hence, we suggest that the straightforward analysis of energy conservation is misleading.
منابع مشابه
Multiscale Geometric Integration of Deterministic and Stochastic Systems
In order to accelerate computations and improve long time accuracy of numerical simulations, this thesis develops multiscale geometric integrators. For general multiscale stiff ODEs, SDEs, and PDEs, FLow AVeraging integratORs (FLAVORs) have been proposed for the coarse time-stepping without any identification of the slow or the fast variables. In the special case of deterministic and stochastic...
متن کاملThe role of symplectic integrators in optimal control
For general optimal control problems, Pontryagin’s maximum principle gives necessary optimality conditions which are in the form of a Hamiltonian differential equation. For its numerical integration, symplectic methods are a natural choice. This article investigates to which extent the excellent performance of symplectic integrators for long-time integrations in astronomy and molecular dynamics...
متن کاملA New High Order Closed Newton-Cotes Trigonometrically-fitted Formulae for the Numerical Solution of the Schrodinger Equation
In this paper, we investigate the connection between closed Newton-Cotes formulae, trigonometrically-fitted methods, symplectic integrators and efficient integration of the Schr¨odinger equation. The study of multistep symplectic integrators is very poor although in the last decades several one step symplectic integrators have been produced based on symplectic geometry (see the relevant lit...
متن کاملBackward error analysis of multiscale symplectic integrators and propagators
Symplectic integrators are used in molecular dynamics simulations for their to excellent long term behavior, due to the existence of the associated shadow Hamiltonian. Improvements in the efficiency of simulations can be obtained by the introduction of multiple timestep methods such as Verlet-I/r-RESPA, but these schemes generally require switches to separate the forces efficiently. The authors...
متن کاملMolecular dynamics integration and molecular vibrational theory. II. Simulation of nonlinear molecules.
A series of molecular dynamics (MD) simulations of nonlinear molecules has been performed to test the efficiency of newly introduced semianalytical second-order symplectic time-reversible MD integrators that combine MD and the standard theory of molecular vibrations. The simulation results indicate that for the same level of accuracy, the new algorithms allow significantly longer integration ti...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- SIAM J. Scientific Computing
دوره 18 شماره
صفحات -
تاریخ انتشار 1997